Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003762.1 Hibiscus syriacus cultivar Beakdansim tig00008061_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67199

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5394--5423
14
2.1
15
93
6
53
26
50
20
3
1.64
15660--15729
32
2.2
30
85
12
88
21
7
4
67
1.33
19410--19462
18
2.9
18
94
0
88
22
35
22
18
1.95
23672--23788
18
6.5
18
93
0
189
29
32
20
17
1.95
26407--26443
17
2.2
17
100
0
74
32
16
18
32
1.93
27498--27522
13
1.9
13
100
0
50
68
0
0
32
0.90
29171--29202
2
16.0
2
100
0
64
50
0
0
50
1.00
32416--32455
21
1.9
22
90
10
66
45
5
10
40
1.60
35182--35231
12
4.3
12
85
10
77
12
24
46
18
1.82
35189--35236
22
2.2
22
100
0
96
8
22
50
18
1.74
35235--35281
19
2.6
18
93
3
76
25
31
29
12
1.93
35233--35311
9
8.3
9
76
8
59
26
27
30
15
1.96
42451--42511
17
3.3
17
77
20
68
11
21
45
21
1.82
42444--42510
22
3.0
22
86
4
89
11
22
44
20
1.84
42509--42563
18
2.9
19
91
5
94
27
32
29
10
1.91
42557--42595
21
1.9
21
89
5
62
30
23
25
20
1.98
42507--42594
9
9.3
9
79
7
77
27
28
29
14
1.95
43670--43713
18
2.4
18
77
11
54
38
9
43
9
1.68
43750--43781
10
3.4
10
83
16
50
40
0
25
34
1.56
44430--44485
3
18.7
3
100
0
112
67
0
0
32
0.91
44495--44537
21
2.0
21
100
0
86
62
4
4
27
1.35
46782--46858
31
2.5
30
74
2
73
29
24
10
35
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48795--48899
31
3.4
30
89
5
147
32
15
28
23
1.95
49213--49271
24
2.5
24
94
0
100
59
11
10
18
1.60
54935--54966
13
2.3
15
89
10
50
65
6
21
6
1.38
60451--60493
17
2.5
16
78
14
50
34
0
2
62
1.08
62032--62064
10
3.4
10
87
4
50
27
0
0
72
0.85
62863--62941
30
2.6
30
84
4
88
30
6
13
49
1.67
62976--63029
22
2.5
22
76
8
58
55
9
0
35
1.32
63159--63208
20
2.4
20
83
6
64
28
32
14
26
1.94
63460--63528
22
3.1
21
79
8
75
17
37
18
26
1.93
65368--65466
42
2.4
42
94
0
171
27
37
19
16
1.92
65581--65630
21
2.4
21
86
0
73
22
14
30
34
1.93
66049--66124
21
3.6
21
85
0
107
22
36
18
22
1.95

Tables:   1

The End!