Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003763.1 Hibiscus syriacus cultivar Beakdansim tig00008062_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63332

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5226--5268
15
2.9
15
80
19
54
25
2
0
72
0.97
6803--6860
21
3.2
17
80
19
73
12
22
46
18
1.82
6812--6854
12
3.8
12
76
17
56
9
23
48
18
1.76
6809--6859
21
2.4
22
90
9
88
7
21
50
19
1.72
6856--6934
9
8.3
9
82
8
77
27
26
29
16
1.97
6862--6935
19
3.8
19
77
13
80
28
27
27
17
1.98
6870--6935
10
6.9
9
78
11
60
28
25
27
18
1.98
6862--6935
29
2.5
30
91
6
125
28
27
27
17
1.98
10464--10514
20
2.5
21
77
6
59
39
11
29
19
1.87
18357--18389
7
4.7
7
88
11
50
81
0
18
0
0.68
18359--18389
13
2.3
14
94
5
55
83
0
16
0
0.64
18428--18478
6
7.8
6
80
20
50
80
1
17
0
0.81
18427--18472
21
2.1
22
88
4
67
80
2
17
0
0.81
18426--18478
21
2.6
20
82
11
63
79
1
18
0
0.83
19582--19890
106
2.9
105
89
1
474
35
26
16
21
1.95
19802--19985
95
1.9
95
86
0
260
32
23
20
23
1.98
22026--22102
4
18.8
4
73
12
50
27
2
0
70
1.01
22444--22470
2
13.5
2
100
0
54
48
0
0
51
1.00
22576--22648
15
4.7
15
74
17
60
15
6
2
75
1.13
26763--26801
13
2.9
14
84
7
62
38
12
0
48
1.42
28276--28323
19
2.5
20
82
3
53
56
2
0
41
1.11
31477--31534
27
2.1
27
96
0
107
10
44
15
29
1.79
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32437--32506
34
2.1
34
97
0
131
38
2
18
40
1.66
32448--32503
17
3.3
17
69
18
53
33
3
19
42
1.69
32437--32520
34
2.5
34
88
3
98
38
4
16
40
1.70
43750--43862
43
2.6
43
85
2
138
38
5
17
38
1.73
44235--44315
41
2.0
41
100
0
162
44
29
7
18
1.77
51487--51541
2
27.5
2
100
0
110
49
0
0
50
1.00
51797--51914
2
60.5
2
74
17
88
44
3
5
47
1.42
51789--51965
8
20.0
9
68
18
72
45
2
6
45
1.43
52719--52760
19
2.2
19
86
0
57
42
23
2
30
1.67
53855--53928
30
2.4
31
76
15
80
37
16
14
31
1.89
57896--57935
20
2.0
20
90
4
64
55
7
0
37
1.29
61994--62036
22
1.9
23
85
4
61
48
9
6
34
1.62
62797--62942
73
2.0
73
95
0
265
28
5
14
51
1.64

Tables:   1

The End!