Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003764.1 Hibiscus syriacus cultivar Beakdansim tig00008064_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72945

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7668--7754
46
2.0
43
81
6
102
47
17
21
13
1.82
8360--8973
106
5.8
105
93
0
996
33
25
18
21
1.96
8360--8973
211
2.9
211
92
1
1016
33
25
18
21
1.96
9980--10023
23
1.9
23
90
0
70
50
13
4
31
1.62
12411--12469
28
2.1
28
90
0
91
32
1
13
52
1.50
16113--16142
14
2.1
14
100
0
60
46
0
13
40
1.43
16760--16847
33
2.7
32
83
3
95
18
13
21
46
1.83
16774--16858
33
2.6
33
84
0
107
15
12
24
47
1.81
16843--16888
16
2.9
16
80
0
56
2
8
34
54
1.43
16848--16913
16
4.1
16
74
0
60
12
4
30
53
1.58
20639--20708
20
3.5
20
92
0
113
52
4
7
35
1.48
22135--22173
21
1.9
20
84
5
51
33
15
20
30
1.94
23577--23665
40
2.2
39
77
13
92
48
3
0
48
1.18
23637--23683
22
2.1
23
88
4
69
44
2
0
53
1.12
23863--23907
23
2.0
23
90
0
72
53
2
0
44
1.13
27089--27149
2
30.5
2
96
0
113
52
0
47
0
1.00
33051--33153
52
2.0
52
98
0
197
21
23
13
41
1.88
37607--37709
52
2.0
52
98
0
197
21
23
13
41
1.88
38789--38829
21
2.0
21
95
0
73
48
0
0
51
1.00
39571--39634
23
2.8
23
75
0
65
46
14
25
14
1.81
43546--43753
104
2.0
104
96
0
380
42
6
12
38
1.68
51702--51745
17
2.6
17
89
7
63
25
11
0
63
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51813--51860
19
2.6
18
86
6
60
35
2
2
60
1.20
51861--51914
21
2.5
22
79
5
58
38
3
1
55
1.28
52121--52184
31
2.1
31
96
0
119
53
6
9
31
1.58
55157--55247
31
3.1
31
62
30
72
43
4
14
37
1.65
55416--55463
21
2.3
20
78
3
51
39
6
2
52
1.39
59674--59702
14
2.0
15
93
6
51
68
0
0
31
0.89
69424--69498
21
3.6
21
80
3
98
40
18
25
16
1.91
69407--69498
41
2.3
41
98
1
177
39
18
25
17
1.92
69425--69621
41
4.8
41
79
5
143
35
22
20
22
1.96
69487--69621
20
6.7
20
78
7
112
32
24
17
25
1.97
69784--69827
22
2.0
22
100
0
88
22
45
13
18
1.84
70067--70125
20
3.0
20
87
0
73
16
18
22
42
1.89
71414--71455
17
2.5
17
84
3
59
28
40
16
14
1.88
71834--71872
18
2.1
19
85
4
53
5
2
15
76
1.06
71930--71985
20
2.8
20
83
2
69
37
23
23
16
1.93
72058--72114
14
3.8
14
78
17
60
10
17
24
47
1.79
72053--72130
32
2.4
32
93
0
129
11
17
23
47
1.80
72104--72168
19
3.5
19
75
10
71
15
23
23
38
1.92

Tables:   1

The End!