Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003767.1 Hibiscus syriacus cultivar Beakdansim tig00008068_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63245

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
651--691
22
1.9
21
85
5
55
46
0
0
53
1.00
4049--4396
126
2.8
126
88
1
513
32
10
19
36
1.87
10534--10568
18
1.9
18
100
0
70
25
22
22
28
1.99
11441--11498
20
2.9
20
87
5
82
39
5
24
31
1.77
14915--15000
45
1.9
45
90
0
136
51
13
22
12
1.75
14913--15012
45
2.2
45
78
0
101
51
15
21
13
1.76
20802--20863
21
2.8
22
70
13
56
54
0
4
40
1.22
22849--22895
20
2.5
18
82
6
58
48
6
21
23
1.72
26320--26365
3
15.0
3
81
4
56
67
0
30
2
1.03
33428--33477
25
2.0
25
100
0
100
28
8
32
32
1.86
34431--34460
15
2.0
15
93
0
51
50
0
0
50
1.00
34516--34562
18
2.5
19
86
3
69
61
0
2
36
1.08
34742--34839
15
7.0
14
71
16
60
65
0
4
30
1.11
34736--34811
23
3.3
23
78
14
86
63
0
5
31
1.17
34742--34783
3
14.3
3
80
14
52
69
0
4
26
1.08
35004--35047
2
22.0
2
100
0
88
50
0
0
50
1.00
36058--36140
3
28.0
3
85
7
116
63
1
1
33
1.10
40712--40784
33
2.2
33
80
0
92
19
21
17
41
1.91
45624--45669
22
2.1
23
88
11
71
28
0
4
67
1.10
45624--45686
21
3.0
22
84
9
69
31
0
4
63
1.15
45664--45700
16
2.3
16
95
0
65
32
0
5
62
1.18
48521--48591
33
2.1
34
84
2
90
39
8
5
46
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54183--54260
31
2.6
30
84
8
104
34
14
12
38
1.84

Tables:   1

The End!