Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003770.1 Hibiscus syriacus cultivar Beakdansim tig00008074_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62981

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6050--6127
26
3.0
27
80
12
85
44
1
1
52
1.17
6080--6162
36
2.2
36
85
12
105
44
0
1
54
1.08
6034--6188
62
2.5
64
90
6
248
41
1
1
54
1.19
6178--6239
19
3.3
19
78
15
58
37
1
0
61
1.06
6433--6473
20
2.1
19
86
4
55
53
4
0
41
1.22
6693--6752
31
1.9
31
93
0
102
43
10
6
40
1.64
32853--32879
14
1.9
14
100
0
54
22
0
0
77
0.76
36437--36468
16
2.0
16
100
0
64
43
18
12
25
1.85
37760--37818
28
2.1
28
100
0
118
20
18
23
37
1.94
41697--41755
29
2.0
29
96
0
109
23
13
11
50
1.74
45873--45914
16
2.6
16
100
0
84
38
23
26
11
1.90
46395--46453
29
2.0
29
100
0
118
23
13
13
49
1.78
48655--48696
21
2.0
20
86
4
57
38
14
7
40
1.73
53345--53389
21
2.1
21
87
0
63
31
28
24
15
1.96
54254--54337
31
2.8
31
94
3
145
21
20
19
39
1.93
57417--57461
21
2.1
21
87
0
63
31
28
24
15
1.96
57811--57850
18
2.4
16
87
8
53
37
5
17
40
1.72
57811--57851
16
2.4
18
88
8
59
36
4
17
41
1.71
58321--58475
31
5.0
31
89
3
233
21
20
21
36
1.95
61114--61150
6
5.8
6
87
12
56
18
16
16
48
1.81

Tables:   1

The End!