Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003773.1 Hibiscus syriacus cultivar Beakdansim tig00008077_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61800

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1798--1851
24
2.3
24
93
3
92
11
24
24
40
1.87
5382--5431
15
3.4
15
71
15
50
46
0
34
20
1.51
5372--5431
29
2.1
29
93
0
102
48
0
33
18
1.48
6700--6774
32
2.3
32
88
4
107
25
20
20
34
1.96
11232--11306
31
2.4
32
88
6
118
25
21
21
32
1.98
25447--25505
7
8.4
7
98
0
100
0
52
0
47
1.00
45148--45224
29
2.6
30
76
13
79
20
15
9
54
1.68
45167--45223
30
1.9
29
86
10
80
21
12
7
59
1.56
46204--46230
2
13.5
2
100
0
54
51
0
0
48
1.00
48908--48957
24
2.1
24
88
0
73
34
20
20
26
1.96
52723--52758
9
4.0
9
92
0
54
0
55
0
44
0.99
54643--54700
19
2.8
22
76
15
68
31
3
27
37
1.73
54654--54714
22
2.8
22
67
18
54
31
4
29
34
1.79
55111--55422
21
15.2
21
66
15
116
39
22
16
21
1.92
55110--55463
40
8.7
40
82
6
399
39
22
15
21
1.91
55114--55461
124
2.8
124
84
7
476
40
22
15
20
1.91
55145--55552
61
6.8
59
72
13
284
39
22
15
21
1.91
55385--55450
21
3.4
19
70
10
62
42
21
15
21
1.89
55461--55546
21
4.2
21
71
5
77
37
24
17
20
1.94
61423--61457
18
1.9
18
88
0
52
40
8
0
51
1.33

Tables:   1

The End!