Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003776.1 Hibiscus syriacus cultivar Beakdansim tig00008085_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72698

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3126--3153
3
9.3
3
100
0
56
67
32
0
0
0.91
35088--35483
201
2.0
192
86
4
540
23
16
16
42
1.88
41797--41827
3
10.7
3
93
6
55
64
0
0
35
0.94
41993--42327
43
7.7
43
71
11
209
23
18
31
26
1.98
42035--42373
130
2.6
129
90
3
511
23
19
30
26
1.98
42405--42466
28
2.2
28
88
5
90
51
12
11
24
1.72
43494--43651
30
5.1
30
73
20
130
42
13
12
32
1.81
43438--43608
67
2.5
67
93
0
288
43
11
12
31
1.79
43566--43654
27
3.2
27
87
7
117
43
14
10
31
1.79
43901--44004
36
3.0
36
83
4
133
36
11
19
32
1.87
43902--44020
36
3.4
36
80
6
120
36
12
20
30
1.90
43972--44208
105
2.3
101
81
11
268
37
11
19
30
1.88
44673--44718
4
12.0
4
90
9
78
23
0
26
50
1.50
45930--45969
11
3.6
11
87
12
64
5
10
10
75
1.19
45918--45999
22
3.7
24
73
17
86
2
17
9
70
1.25
45964--45998
18
1.9
18
88
0
52
0
22
8
68
1.16
46604--46693
46
2.0
45
88
2
135
38
11
26
23
1.88
56015--56058
3
15.0
3
90
4
72
70
0
0
29
0.88
56014--56054
20
2.0
20
95
0
73
73
0
0
26
0.84
56115--56147
17
2.0
17
88
5
50
33
12
21
33
1.90
63796--63865
33
2.2
32
87
7
97
55
2
1
40
1.23
64312--64357
19
2.5
19
86
6
60
63
2
17
17
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
66400--66578
92
1.9
89
98
1
277
39
20
11
29
1.88

Tables:   1

The End!