Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003782.1 Hibiscus syriacus cultivar Beakdansim tig00008097_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  101927

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2444--2495
26
2.0
26
85
3
70
28
21
11
38
1.88
5137--5254
39
3.0
39
86
4
166
14
30
24
30
1.95
11688--11742
20
2.8
20
97
0
101
21
32
29
16
1.95
18603--18648
23
2.0
23
100
0
92
30
21
30
17
1.96
37308--37606
99
3.0
99
100
0
598
35
20
16
28
1.94
40513--40571
30
2.0
30
86
0
82
25
11
13
49
1.76
40827--40882
15
3.4
16
79
16
53
66
0
8
25
1.21
49610--49652
9
5.4
8
84
15
54
69
0
4
25
1.07
49861--49886
12
2.2
12
100
0
52
42
0
19
38
1.51
51535--51580
20
2.3
20
100
0
92
23
23
26
26
2.00
54083--54141
30
2.0
30
86
0
82
25
11
13
49
1.76
54415--54452
18
2.2
16
90
9
58
71
0
5
23
1.07
63145--63177
9
3.8
9
96
4
59
69
0
6
24
1.10
63386--63411
12
2.2
12
100
0
52
42
0
19
38
1.51
67933--67997
34
2.0
32
85
8
87
30
23
21
24
1.99
72442--72506
34
2.0
32
85
8
87
32
23
20
24
1.98
76698--76727
12
2.5
12
94
0
51
26
0
23
50
1.50
79812--79863
24
2.0
27
85
10
74
69
0
3
26
1.06
81932--81968
18
2.1
18
100
0
74
27
10
10
51
1.70
81931--81972
18
2.5
16
85
14
66
30
11
11
45
1.77
82701--82771
31
2.3
31
85
0
88
26
21
12
39
1.89
82718--82778
31
2.0
31
93
0
104
22
19
16
40
1.90
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
84548--84591
17
2.6
18
83
16
58
56
9
0
34
1.31
87756--87784
13
2.2
13
100
0
58
37
10
13
37
1.79
88768--88902
35
3.9
35
77
12
109
48
26
0
24
1.51
88807--88928
7
17.4
7
82
3
102
47
31
0
20
1.50
90157--90244
11
7.8
11
72
5
59
30
21
21
26
1.98
90157--90223
23
2.9
23
90
0
107
34
22
19
23
1.97
90476--90559
16
5.3
16
85
5
109
9
10
19
60
1.56
90470--90559
33
2.8
32
86
6
130
8
10
20
61
1.54
99460--99513
23
2.3
24
81
9
76
24
18
20
37
1.94
101746--101783
3
12.7
3
100
0
76
31
0
0
68
0.90

Tables:   1

The End!