Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003784.1 Hibiscus syriacus cultivar Beakdansim tig00008101_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76052

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18825--18884
31
1.9
31
93
0
102
40
6
10
43
1.64
19350--19411
18
3.2
20
78
19
62
61
0
1
37
1.06
19406--19567
67
2.6
63
85
12
226
55
1
0
41
1.15
19473--19530
27
2.0
27
83
12
71
51
1
0
46
1.11
19401--19563
62
2.6
64
87
9
230
55
1
1
41
1.18
28853--29514
112
5.9
112
93
1
960
27
19
15
37
1.92
32560--32783
114
2.0
113
92
0
376
30
20
15
33
1.93
38337--38375
15
2.7
15
88
4
53
51
12
15
20
1.76
38337--38384
14
3.4
14
85
2
51
50
12
14
22
1.77
40432--40461
7
4.3
7
95
0
51
66
3
0
30
1.07
42744--42819
28
2.7
29
91
4
136
14
32
26
26
1.94
42881--42912
14
2.3
14
94
0
55
6
31
37
25
1.81
49924--49982
25
2.3
26
88
2
93
22
10
35
32
1.87
50435--50560
37
3.5
37
81
9
170
11
8
38
41
1.72
50434--50553
33
3.6
32
82
10
150
11
8
38
41
1.72
51129--51167
17
2.2
18
90
4
62
28
20
10
41
1.85
51228--51399
92
1.9
91
97
1
326
31
26
20
21
1.98
59273--59354
42
2.0
42
82
4
103
31
29
18
20
1.96
59709--59742
10
3.5
10
84
8
52
76
8
5
8
1.15
59709--59752
19
2.3
19
96
0
79
75
9
4
11
1.19
59719--59932
104
2.1
104
91
3
342
48
7
4
39
1.52
63770--63796
14
1.9
14
100
0
54
74
0
0
25
0.83
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63926--63977
20
2.6
20
87
0
59
46
15
19
19
1.85
64379--64467
40
2.2
39
82
5
106
16
13
21
48
1.81
64402--64464
20
3.2
20
97
0
117
15
12
25
46
1.82
64458--64504
20
2.3
20
82
7
60
27
17
21
34
1.95
67336--67410
37
2.1
37
97
2
143
30
32
13
24
1.93
70305--70355
22
2.3
22
93
3
84
33
21
27
17
1.96
74662--74717
22
2.5
23
88
2
78
30
26
25
17
1.97

Tables:   1

The End!