Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003787.1 Hibiscus syriacus cultivar Beakdansim tig00008105_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60496

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2899--2945
21
2.2
21
100
0
94
48
4
19
27
1.67
6405--6471
32
2.1
32
81
10
75
37
20
14
26
1.92
7139--7175
15
2.4
16
86
13
60
45
0
5
48
1.25
13048--13123
15
5.3
15
68
15
61
40
1
2
55
1.22
13045--13124
42
1.9
41
92
2
133
41
1
3
53
1.27
16181--16252
14
5.1
14
73
15
60
41
1
2
54
1.23
16161--16253
41
2.2
42
90
5
154
45
2
3
49
1.30
18205--18347
60
2.4
60
79
8
166
31
15
21
31
1.94
21105--21130
2
13.0
2
100
0
52
50
0
0
50
1.00
27012--27136
61
2.0
61
90
0
196
24
15
12
47
1.80
30263--30296
16
2.1
16
94
0
59
35
14
5
44
1.70
31072--31129
31
1.9
31
89
3
91
41
17
10
31
1.83
31453--31520
35
1.9
36
88
8
104
47
4
0
48
1.22
53829--53901
23
3.1
23
75
18
78
53
17
17
10
1.72

Tables:   1

The End!