Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000379.1 Hibiscus syriacus cultivar Beakdansim tig00000695_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72980

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7708--7831
43
2.8
44
85
4
162
31
13
24
30
1.94
7706--7842
44
3.1
44
87
2
186
29
13
24
32
1.94
8176--8236
21
2.9
21
82
0
68
0
24
21
54
1.45
14250--14286
18
2.1
17
95
5
65
70
16
5
8
1.30
14742--14767
2
13.0
2
100
0
52
50
0
0
50
1.00
18305--18349
22
2.0
22
91
0
72
28
20
4
46
1.69
19975--21961
1000
2.0
1000
99
0
3965
27
19
26
26
1.99
23223--26208
999
3.0
1000
99
0
5956
27
20
25
26
1.99
50299--50375
36
2.1
37
95
2
138
32
10
14
42
1.79
52854--52999
2
73.0
2
100
0
292
50
0
0
50
1.00
53652--53710
25
2.4
25
100
0
118
40
23
15
20
1.90
55346--55403
23
2.5
24
91
5
100
25
15
5
53
1.63
63547--63581
18
1.9
18
88
0
52
8
25
0
65
1.21
68005--68194
39
4.9
39
77
3
105
31
22
26
19
1.98
68060--68194
39
3.5
39
81
2
164
30
24
28
16
1.96
69632--69675
23
2.0
22
86
4
61
43
18
6
31
1.76
71624--71691
21
3.1
22
67
16
61
25
22
25
27
1.99

Tables:   1

The End!