Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003793.1 Hibiscus syriacus cultivar Beakdansim tig00008116_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59429

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9454--9483
2
15.0
2
100
0
60
50
0
0
50
1.00
10020--10097
26
3.0
26
75
14
79
2
29
7
60
1.38
10430--10470
21
2.0
21
85
9
57
12
39
4
43
1.63
22493--22570
29
2.7
29
78
6
95
35
7
10
46
1.67
22643--22688
24
1.9
24
90
0
74
41
4
6
47
1.49
22873--22936
29
2.2
29
86
5
85
35
6
9
48
1.61
22945--23091
67
2.2
68
91
1
233
38
17
7
36
1.78
24926--24983
30
2.0
29
90
10
91
29
1
25
43
1.65
25180--25246
34
2.0
33
88
8
100
58
10
4
26
1.50
25475--25515
20
2.0
20
85
0
55
58
17
14
9
1.62
25497--25528
14
2.3
14
94
0
55
68
21
9
0
1.17
25532--25570
10
3.9
10
79
0
51
61
10
7
20
1.52
25740--25792
14
3.8
14
84
0
70
56
18
13
11
1.66
25821--25845
13
1.9
13
100
0
50
12
24
8
56
1.62
28683--28734
24
2.2
24
96
0
95
55
11
13
19
1.68
29602--29676
29
2.8
28
76
9
84
42
21
1
34
1.61
42204--42791
291
2.0
291
97
0
1113
33
16
15
34
1.90
57568--57665
35
2.9
35
89
4
148
33
28
28
9
1.88
57755--57869
24
4.8
24
86
6
153
40
20
16
22
1.91
57731--57886
48
3.2
48
76
8
122
44
19
13
22
1.86
59317--59417
30
3.3
29
69
25
82
26
27
9
35
1.88

Tables:   1

The End!