Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003796.1 Hibiscus syriacus cultivar Beakdansim tig00008120_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32781

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
197--683
181
2.7
182
93
2
831
33
17
14
33
1.91
2037--2073
14
2.6
14
100
0
74
45
18
13
21
1.84
2278--2355
9
8.7
9
76
0
75
23
33
6
37
1.80
2278--2355
6
13.0
6
81
0
75
23
33
6
37
1.80
2291--2363
36
2.0
36
91
0
119
20
32
9
36
1.85
2282--2359
12
6.2
12
81
8
93
21
33
7
37
1.82
3804--4744
194
4.9
197
92
6
1522
31
17
15
36
1.91
4863--4911
19
2.6
19
93
0
80
57
10
2
30
1.43
6781--6824
21
2.1
21
91
0
70
15
31
11
40
1.83
9046--9102
20
2.9
20
80
12
64
21
15
8
54
1.68
9228--9274
20
2.3
20
89
10
78
17
17
10
55
1.69
16577--16626
16
3.1
16
75
16
57
40
10
8
42
1.68
16623--16667
14
3.1
14
81
9
54
26
2
4
66
1.22
16384--16864
244
2.0
245
97
0
919
36
12
8
42
1.74
22418--22458
12
3.3
13
80
10
50
36
17
0
46
1.48
29664--29790
65
1.9
66
83
12
163
37
3
5
53
1.40
29696--29780
40
2.1
42
82
8
104
37
3
3
55
1.34

Tables:   1

The End!