Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003798.1 Hibiscus syriacus cultivar Beakdansim tig00008124_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61225

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
367--442
35
2.2
35
90
0
116
35
1
25
38
1.64
1670--1721
24
2.1
25
86
10
72
32
23
23
21
1.98
1845--1890
24
1.9
24
90
0
74
28
23
26
21
1.99
2495--2915
215
2.0
215
91
3
697
31
19
12
36
1.89
4055--4111
3
19.0
3
75
13
55
35
0
0
64
0.93
4054--4124
24
2.9
25
79
10
83
38
0
0
61
0.96
4054--4123
34
2.1
34
86
5
97
37
0
0
62
0.95
4069--4122
21
2.8
20
75
21
60
38
0
0
61
0.96
5469--5511
18
2.4
18
88
7
61
46
0
2
51
1.13
5468--5513
19
2.3
20
75
21
51
43
0
2
54
1.12
5567--5768
108
1.9
108
82
3
255
38
7
8
45
1.64
5631--5684
24
2.3
23
84
9
65
44
1
0
53
1.11
6452--6485
17
2.0
17
100
0
68
41
11
17
29
1.85
7461--7505
22
2.1
22
88
8
67
22
11
6
60
1.54
8477--8517
19
2.2
19
90
0
64
41
4
12
41
1.64
9260--9379
2
60.0
2
100
0
240
0
50
0
50
1.00
9741--9777
2
18.5
2
88
0
56
45
0
0
54
1.00
10478--10531
17
3.1
17
84
7
63
38
1
0
59
1.08
18665--18778
49
2.4
45
81
11
115
14
7
13
64
1.47
18698--18773
24
3.1
24
71
3
80
13
9
11
65
1.46
40204--40270
21
3.1
22
80
8
75
31
2
2
62
1.25
40214--40275
22
2.9
22
81
15
69
27
4
4
62
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44159--44186
14
2.0
14
100
0
56
42
21
14
21
1.88
48335--48375
14
3.0
14
86
10
50
51
0
0
48
1.00

Tables:   1

The End!