Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000038.1 Hibiscus syriacus cultivar Beakdansim tig00000059_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61363

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
566--596
15
2.1
15
93
0
53
51
0
3
45
1.17
1858--1885
2
14.0
2
100
0
56
50
0
0
50
1.00
15497--15537
18
2.3
18
86
0
55
19
29
21
29
1.98
22357--22384
2
14.0
2
100
0
56
50
0
0
50
1.00
23474--23533
3
20.0
3
100
0
120
66
0
0
33
0.92
27855--27947
46
2.0
46
95
0
168
38
13
6
40
1.71
38235--38308
30
2.4
31
86
4
105
37
14
29
17
1.90
38386--38468
2
45.0
2
70
15
54
50
0
0
49
1.00
39597--39646
12
4.2
12
90
10
52
10
72
0
18
1.12
39613--39648
6
6.0
6
100
0
72
16
66
0
16
1.25
40348--40382
15
2.3
15
100
0
70
28
34
22
14
1.93
47193--47242
15
3.3
15
100
0
100
28
34
24
14
1.93
48935--48959
13
1.9
13
100
0
50
28
0
0
72
0.86
49703--49747
16
2.7
17
82
6
56
46
2
4
46
1.35
50039--50075
19
1.9
19
94
0
65
32
2
13
51
1.55
49899--50184
122
2.3
123
90
4
441
34
9
14
40
1.79
50312--50378
17
3.8
17
88
7
107
46
4
7
41
1.52
56959--57004
23
2.1
22
84
8
58
63
4
2
30
1.26
57271--57305
2
17.5
2
100
0
70
51
0
0
48
1.00
57411--57460
22
2.3
21
86
13
66
62
0
4
34
1.14

Tables:   1

The End!