Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000380.1 Hibiscus syriacus cultivar Beakdansim tig00000696_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69022

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12195--12237
20
2.2
20
91
0
68
32
13
20
32
1.92
15890--16049
54
3.0
54
83
0
158
23
21
20
33
1.97
17259--17315
29
1.9
30
92
3
98
38
17
8
35
1.81
23096--23133
20
1.9
20
84
10
51
34
2
15
47
1.60
33599--33656
15
4.3
14
75
16
52
84
0
15
0
0.62
33595--33655
28
2.1
30
93
6
108
83
0
16
0
0.64
33595--33657
10
6.4
10
80
9
67
82
0
17
0
0.67
34593--34633
20
2.0
21
85
4
57
36
2
2
58
1.24
35630--35670
20
2.0
21
85
4
57
58
2
2
36
1.24
36538--36577
19
2.2
19
86
4
55
0
15
5
80
0.88
37041--37096
2
29.5
2
75
10
55
44
0
1
53
1.11
37050--37114
22
3.1
22
80
10
75
49
0
1
49
1.10
37098--37203
3
35.3
3
92
0
176
62
0
3
33
1.13
37100--37210
18
6.2
18
96
0
204
61
0
5
33
1.19
37530--38088
113
5.0
113
91
0
877
29
18
14
37
1.90
38703--39052
84
4.2
84
96
1
632
36
21
14
28
1.92
40178--40237
1
60.0
1
79
0
57
0
11
0
88
0.52
40173--40241
20
3.4
20
76
9
77
0
14
0
85
0.60
40190--40241
11
4.7
11
86
9
79
0
11
0
88
0.52
40178--40237
27
2.2
27
90
3
93
0
11
0
88
0.52
50856--50903
19
2.6
17
81
12
60
72
2
0
25
0.95
52529--52568
19
2.2
19
86
4
55
0
15
5
80
0.88
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53030--53080
22
2.4
21
83
6
66
41
0
1
56
1.10
53079--53179
3
33.7
3
95
0
184
64
0
1
33
1.05
56478--56652
55
3.1
55
82
8
185
45
2
6
46
1.41
56513--56652
19
7.7
17
70
21
72
45
2
6
45
1.41
56762--56796
2
17.5
2
88
11
54
48
0
2
48
1.16
57748--57828
41
2.0
41
100
0
162
27
13
27
32
1.94
65458--65550
17
5.4
17
69
16
57
43
1
6
49
1.35
65583--65713
51
2.7
48
79
10
124
45
1
6
46
1.39
65688--65724
10
3.5
11
82
14
51
45
0
5
48
1.25
65779--65848
3
23.3
3
88
5
61
22
0
10
67
1.20

Tables:   1

The End!