Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003804.1 Hibiscus syriacus cultivar Beakdansim tig00008142_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  64751

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4106--4162
22
2.6
22
83
8
73
47
15
7
29
1.72
4000--4230
126
1.8
126
100
0
462
45
17
6
30
1.74
7468--7582
15
7.7
15
87
0
167
30
6
20
42
1.78
13113--13196
15
5.6
15
85
0
114
29
4
21
44
1.73
13312--13373
23
2.7
23
79
0
70
20
20
24
33
1.97
13299--13398
46
2.1
47
83
8
125
20
24
23
33
1.97
13375--13427
24
2.2
24
93
0
88
20
22
26
30
1.98
15554--15610
22
2.6
23
72
13
57
49
3
1
45
1.29
24222--24260
17
2.2
18
95
4
71
48
10
28
12
1.74
43252--43349
45
2.2
45
85
3
128
36
11
24
27
1.89
52868--52897
15
2.0
15
93
0
51
63
3
20
13
1.43
54836--54898
25
2.5
25
82
7
74
36
12
9
41
1.76
54938--54997
31
2.0
30
87
9
86
36
1
25
36
1.66
55225--55276
23
2.3
23
93
0
86
15
26
28
28
1.96
61016--61062
19
2.5
19
100
0
94
29
17
29
23
1.97
61757--61802
23
2.0
23
91
0
74
21
21
21
34
1.97

Tables:   1

The End!