Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003809.1 Hibiscus syriacus cultivar Beakdansim tig00008164_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  92848

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1195--1238
18
2.4
18
88
7
63
25
4
0
70
1.06
1795--1823
14
2.0
15
93
6
51
34
3
27
34
1.74
7206--7274
34
2.0
34
97
0
129
36
27
10
26
1.88
9283--9555
135
2.0
135
86
2
377
30
20
19
29
1.97
12538--12571
15
2.3
15
100
0
68
35
8
11
44
1.72
22567--22692
46
2.8
45
74
12
121
42
5
21
30
1.75
29652--29772
51
2.5
47
80
12
120
41
6
19
32
1.78
32152--32761
46
13.3
46
85
2
769
43
12
21
22
1.86
37313--37727
46
9.0
46
90
2
645
42
12
23
21
1.86
37714--37879
46
3.6
46
86
0
224
43
10
23
22
1.84
37556--37858
158
1.9
158
90
2
484
42
11
24
21
1.85
37716--37904
92
2.1
92
80
2
209
44
10
22
22
1.83
44281--44316
19
2.0
17
89
10
54
61
2
5
30
1.33
65882--65980
33
3.0
33
90
1
162
23
15
23
38
1.92
70637--70732
33
2.9
33
87
10
142
25
15
22
36
1.94
77348--77399
25
2.1
25
82
7
61
23
25
11
40
1.88
80035--80084
17
2.8
18
77
19
59
66
10
0
24
1.22
88386--88436
22
2.3
22
89
0
75
27
17
23
31
1.97
91118--91153
13
2.8
13
84
16
56
36
8
0
55
1.30
91128--91181
22
2.5
22
84
0
63
35
14
0
50
1.44
91177--91223
15
3.2
15
81
3
51
38
8
4
48
1.53
91290--91335
24
1.9
24
86
8
67
50
0
10
39
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
91640--91695
23
2.4
23
85
8
69
39
0
14
46
1.44
91731--91765
6
5.8
6
96
0
61
51
11
0
37
1.38
91730--91774
14
3.4
14
81
12
58
46
13
0
40
1.43
92277--92355
23
3.4
24
81
10
83
49
2
11
36
1.52
92218--92731
2
258.0
2
65
23
117
50
2
6
40
1.42

Tables:   1

The End!