Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003810.1 Hibiscus syriacus cultivar Beakdansim tig00008167_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41154

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7287--7385
33
3.0
33
90
1
162
23
15
23
38
1.92
12036--12131
33
2.9
33
87
10
142
25
15
22
36
1.94
18739--18790
25
2.1
25
82
7
61
23
25
11
40
1.88
29785--29835
22
2.3
22
89
0
75
27
17
23
31
1.97
31601--31627
3
9.0
3
100
0
54
33
0
0
66
0.92
32530--32621
14
6.3
15
70
16
68
38
11
0
50
1.40
32542--32595
22
2.5
22
84
0
63
35
14
0
50
1.44
32707--32752
24
1.9
24
86
8
67
50
0
10
39
1.38
33062--33120
24
2.3
26
83
11
70
40
0
13
45
1.43
33066--33135
20
3.4
21
73
15
65
40
1
14
44
1.54
33155--33199
14
3.4
14
81
12
58
46
13
0
40
1.43
33156--33190
6
5.8
6
96
0
61
51
11
0
37
1.38
33650--34430
2
395.0
2
64
24
148
45
4
4
44
1.45
34164--34437
142
1.9
143
82
10
344
36
7
2
53
1.42
34143--34418
41
6.8
40
73
16
173
37
7
1
53
1.39
34385--34463
30
2.6
30
80
9
88
41
6
1
50
1.36
34406--34476
38
1.9
36
85
5
97
39
11
1
47
1.48
34494--34536
13
3.1
14
86
6
52
41
6
2
48
1.43
34499--34538
21
1.9
21
89
0
62
40
5
2
52
1.37
34607--34654
19
2.6
18
80
3
51
39
8
2
50
1.44
34730--34820
21
4.7
20
75
10
73
40
4
8
46
1.55
34789--34950
2
83.5
2
68
21
96
48
1
3
46
1.28
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34848--34892
5
9.0
5
100
0
90
60
0
0
40
0.97
34888--34946
11
5.5
11
86
8
68
38
3
5
52
1.40
36469--36761
80
3.7
80
88
4
416
30
26
21
22
1.99

Tables:   1

The End!