Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003815.1 Hibiscus syriacus cultivar Beakdansim tig00008177_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76570

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
366--466
41
2.4
42
88
1
141
23
19
20
35
1.96
668--737
22
3.3
21
67
18
56
21
20
20
38
1.94
649--759
41
2.7
42
90
4
172
20
19
22
36
1.95
489--1324
300
2.8
302
89
4
1264
27
16
21
35
1.94
1808--1856
3
17.0
3
87
8
75
30
0
0
69
0.89
10423--10470
2
24.0
2
100
0
96
50
0
0
50
1.00
15703--15741
20
2.0
20
84
0
51
43
0
2
53
1.14
19090--19129
18
2.2
19
86
4
55
42
0
5
52
1.23
20600--20661
26
2.4
26
100
0
124
27
12
12
46
1.79
20822--20855
10
3.4
10
83
0
50
2
20
14
61
1.46
25606--25634
10
2.9
10
100
0
58
20
0
0
79
0.74
35070--35107
8
4.9
8
90
3
60
89
10
0
0
0.49
35743--36410
105
6.4
105
97
0
1237
34
26
17
22
1.96
39110--39176
34
2.0
32
83
11
82
44
23
10
20
1.82
39013--39215
102
2.0
103
86
6
288
39
23
12
24
1.89
41665--41695
5
6.2
5
100
0
62
0
19
58
22
1.40
42460--42536
23
3.3
23
85
0
100
28
23
25
22
1.99
43512--43554
21
2.0
21
91
8
70
32
18
25
23
1.97
45373--45420
2
24.0
2
86
0
69
43
6
0
50
1.27
46985--47038
23
2.3
23
96
0
99
29
25
25
18
1.98
49303--49363
24
2.6
24
92
2
97
24
21
26
27
1.99
56064--56153
23
3.9
23
82
5
110
26
16
24
32
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58440--58490
26
2.0
26
92
0
84
23
17
5
52
1.66
64740--64821
30
2.7
30
71
17
80
36
19
1
42
1.59

Tables:   1

The End!