Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003822.1 Hibiscus syriacus cultivar Beakdansim tig00008196_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68110

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
824--1101
150
1.9
149
93
6
481
22
23
20
33
1.97
3207--3251
3
15.0
3
85
0
63
64
2
4
28
1.25
3455--3526
2
36.0
2
94
0
126
48
0
2
48
1.16
5437--5513
3
27.0
3
79
10
90
40
0
0
59
0.97
5436--5513
22
3.5
22
94
3
129
41
0
0
58
0.98
5681--5719
19
2.1
19
95
0
69
25
51
17
5
1.66
7023--7048
2
13.0
2
100
0
52
50
0
0
50
1.00
10224--10259
2
18.5
2
94
5
65
52
0
0
47
1.00
12109--12189
18
4.5
18
86
6
119
48
18
8
24
1.76
23943--24078
65
2.1
64
86
4
184
31
15
23
29
1.95
27049--27088
21
1.9
22
85
10
57
37
17
12
32
1.87
34985--35015
3
10.3
3
100
0
62
67
32
0
0
0.91
38085--38169
31
2.7
31
81
1
98
28
31
27
12
1.93
49211--49235
13
1.9
13
100
0
50
56
8
12
24
1.62
55552--55590
12
3.5
11
83
16
53
7
10
0
82
0.86
59191--59232
17
2.4
18
84
8
59
11
11
45
30
1.77
59574--59642
19
3.6
19
96
0
120
30
26
11
31
1.91
59565--59642
38
2.0
39
90
2
122
32
25
10
32
1.89
63121--63145
12
2.1
12
100
0
50
28
0
16
56
1.41

Tables:   1

The End!