Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003824.1 Hibiscus syriacus cultivar Beakdansim tig00008200_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54578

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13477--13512
18
2.0
18
100
0
72
22
27
16
33
1.95
19512--19582
33
2.2
33
92
0
115
33
18
14
33
1.90
25579--25616
17
2.2
17
90
0
58
39
5
18
36
1.73
26389--26425
20
1.9
19
89
10
58
45
10
24
18
1.81
28657--28770
14
8.8
14
67
19
77
43
0
0
54
1.12
28634--28791
65
2.5
64
90
7
243
41
1
1
55
1.19
28786--28847
19
3.3
19
78
15
58
37
1
0
61
1.06
29314--29373
31
1.9
31
89
0
93
43
8
6
41
1.61
30073--30101
2
14.5
2
100
0
58
48
0
0
51
1.00
30988--31103
55
2.1
55
90
3
180
27
6
26
39
1.79
36077--36119
22
2.0
22
85
0
59
44
9
20
25
1.81
41970--42027
19
3.3
18
83
11
66
50
5
0
44
1.24
42057--42118
30
2.0
31
84
9
83
43
1
1
53
1.20
46725--46791
33
2.0
33
97
0
125
31
22
14
31
1.94
49000--49060
16
3.8
16
86
0
86
57
19
11
11
1.64
49278--49369
12
7.9
12
78
13
95
20
21
23
33
1.97
49278--49333
23
2.4
23
96
0
103
21
19
26
32
1.97
49290--49369
35
2.3
35
91
0
124
20
22
22
35
1.96
49290--49374
23
3.7
23
84
6
84
21
22
22
34
1.97
50228--50325
24
4.1
24
86
5
128
57
19
10
13
1.64
50252--50303
14
4.0
14
73
19
58
59
21
7
11
1.56

Tables:   1

The End!