Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003838.1 Hibiscus syriacus cultivar Beakdansim tig00008226_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68118

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13787--13820
17
1.9
18
88
5
52
41
5
2
50
1.42
26793--27258
233
2.0
234
98
0
907
22
16
14
46
1.83
50556--50603
21
2.2
22
88
3
71
33
16
10
39
1.83
51722--51760
16
2.4
17
87
12
55
41
0
5
53
1.23
57253--57295
23
1.9
22
85
4
59
41
2
4
51
1.35
58906--58948
21
2.1
20
86
4
59
0
9
30
60
1.28
59502--59678
36
4.7
39
74
14
117
40
5
5
49
1.49
59541--59681
36
3.9
35
79
9
131
41
7
4
46
1.53
59568--59717
36
4.3
33
78
10
129
42
7
4
46
1.50
60243--60772
164
3.2
165
83
4
593
23
21
24
30
1.99
60258--60784
85
6.3
84
80
4
548
23
20
25
30
1.99
60312--60770
249
1.8
249
90
2
733
24
20
24
30
1.99
60908--61439
110
4.8
110
92
0
875
25
17
22
34
1.96
65017--65046
12
2.5
12
94
0
51
56
0
3
40
1.16
65912--65954
21
2.1
20
91
4
68
0
6
30
62
1.21
66468--66529
12
5.2
12
79
12
56
70
3
4
20
1.19
66498--66540
3
14.7
3
81
13
54
65
4
0
30
1.13
66507--66555
9
5.1
10
79
20
52
61
4
0
34
1.15
66791--66841
26
2.0
26
92
7
86
37
3
5
52
1.44

Tables:   1

The End!