Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003845.1 Hibiscus syriacus cultivar Beakdansim tig00008247_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81063

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3741--3848
54
2.0
55
90
1
173
26
28
11
33
1.91
9649--9691
15
2.9
15
82
6
52
32
0
2
65
1.06
10496--10547
18
2.7
19
73
5
52
55
0
1
42
1.10
11469--11508
17
2.4
17
91
0
62
15
27
35
22
1.94
29373--29461
45
2.0
45
86
0
124
21
22
16
39
1.92
31937--31967
16
1.9
16
93
0
53
22
35
22
19
1.96
32233--32271
15
2.6
16
80
12
55
30
25
28
15
1.96
38205--38271
24
2.8
24
76
0
71
41
4
50
2
1.37
38611--38661
24
2.1
24
88
0
75
19
9
56
13
1.65
42738--42802
18
4.0
16
75
18
55
32
1
0
66
1.01
46032--46112
22
3.6
22
96
1
144
24
29
27
18
1.98
46046--46108
10
5.5
13
65
27
52
26
26
26
19
1.99
47640--47684
21
2.1
21
87
0
63
15
24
28
31
1.96
50854--50934
22
3.6
22
96
1
144
24
29
27
18
1.98
50868--50930
10
5.5
13
65
27
52
26
26
26
19
1.99
51583--51653
2
35.5
2
100
0
142
50
0
0
49
1.00
52511--52555
21
2.1
21
87
0
63
15
24
28
31
1.96
53731--53778
19
2.5
19
96
0
87
50
25
0
25
1.50
61755--61837
27
3.2
25
77
12
71
32
9
13
44
1.76
61755--61811
27
2.2
26
84
12
73
29
10
14
45
1.78
70148--70187
21
1.9
21
89
0
62
10
25
40
25
1.86

Tables:   1

The End!