Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000385.1 Hibiscus syriacus cultivar Beakdansim tig00000708_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47630

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11660--11712
26
2.1
26
85
3
72
26
11
22
39
1.88
12853--12913
31
2.0
31
93
0
104
39
6
9
44
1.64
12938--12986
22
2.2
22
85
3
62
55
12
0
32
1.37
12926--13478
54
10.4
54
83
7
430
52
12
0
34
1.40
12958--13478
32
18.4
32
68
29
307
52
13
0
34
1.40
13048--13095
22
2.2
22
100
0
96
56
16
0
27
1.41
13178--13220
22
2.0
22
100
0
86
51
13
0
34
1.42
13180--13228
22
2.2
22
88
3
71
55
14
0
30
1.40
13232--13274
22
2.0
22
100
0
86
51
13
0
34
1.42
13234--13356
22
5.2
22
72
15
77
52
13
0
33
1.41
13238--13380
74
1.9
74
97
0
268
51
13
0
34
1.42
13181--13512
128
2.6
128
89
6
495
52
12
0
35
1.39
13360--13402
22
2.0
22
100
0
86
51
13
0
34
1.42
13362--13410
22
2.2
22
88
3
71
55
14
0
30
1.40
13414--13456
22
2.0
22
100
0
86
51
13
0
34
1.42
13325--13589
54
5.3
47
85
10
252
50
7
0
41
1.30
13382--13516
32
4.1
33
67
20
95
51
10
0
38
1.36
13500--13589
15
6.0
15
94
0
144
48
0
0
51
1.00
13404--13559
67
2.3
67
83
6
192
50
6
0
42
1.27
17897--17936
11
3.6
12
80
12
50
42
10
7
40
1.67
18065--18123
18
3.2
18
81
13
59
52
0
6
40
1.28
18085--18121
7
5.6
7
87
6
51
54
0
10
35
1.36
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18084--18121
13
2.9
13
81
14
51
55
0
10
34
1.34
18282--18525
108
2.3
104
85
9
323
41
6
9
42
1.64
19822--19915
39
2.4
39
85
0
134
18
29
21
30
1.97
21031--21056
7
3.7
7
100
0
52
30
23
30
15
1.95
23556--23644
39
2.3
39
82
3
108
17
28
22
31
1.97
24215--24298
2
42.5
2
90
7
136
47
2
0
50
1.14
25420--25478
2
30.5
2
93
6
104
52
0
0
47
1.00
25824--25923
2
50.0
2
96
4
184
50
0
1
49
1.07
33323--33375
23
2.3
22
75
9
52
45
1
1
50
1.23
33544--33581
20
1.9
20
88
0
58
21
26
10
42
1.85
38353--38383
2
15.5
2
100
0
62
48
0
0
51
1.00
42673--42728
24
2.3
25
81
9
71
25
16
16
42
1.87
44390--44449
29
2.0
29
83
6
75
48
5
10
36
1.59

Tables:   1

The End!