Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003851.1 Hibiscus syriacus cultivar Beakdansim tig00008265_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66070

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1036--1085
26
1.9
26
84
8
66
34
6
8
52
1.55
2208--2253
24
2.0
23
86
4
65
23
10
17
47
1.79
3273--3314
19
2.2
19
87
8
59
38
7
4
50
1.51
9552--9608
27
2.1
27
83
0
69
59
17
10
12
1.60
10284--10329
19
2.3
20
92
3
76
34
6
4
54
1.46
13944--13994
26
2.0
26
88
0
75
11
17
25
45
1.83
14002--14069
3
22.7
3
82
5
84
60
0
0
39
0.97
14007--14069
24
2.6
25
92
5
103
58
0
0
41
0.98
14220--15154
301
3.1
303
97
1
1745
34
23
19
22
1.96
14220--15154
76
12.4
76
96
1
1722
34
23
19
22
1.96
16155--16209
22
2.5
22
93
0
101
40
14
10
34
1.81
18701--19030
113
2.9
113
92
0
516
31
21
14
33
1.93
23657--23711
26
2.1
26
86
0
74
10
16
29
43
1.82
25059--25116
25
2.4
24
82
2
71
22
10
0
67
1.21
26411--26444
10
3.4
10
87
0
50
23
2
0
73
0.97
35828--35925
52
1.9
51
87
2
142
48
14
22
14
1.79
36686--37563
105
8.4
105
96
0
1593
33
25
17
22
1.96
39364--39399
2
18.0
2
100
0
72
50
0
0
50
1.00
39430--39488
18
3.2
20
76
16
72
23
6
0
69
1.12
40209--40273
3
21.7
3
84
6
87
61
0
0
38
0.96
54893--54960
29
2.3
29
84
0
82
44
23
4
27
1.72
55007--55053
13
3.8
13
72
16
55
8
23
48
19
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
55006--55054
23
2.1
23
92
0
80
8
22
48
20
1.75
54987--55065
23
3.4
23
78
5
61
16
25
40
17
1.90
62214--62248
18
2.0
18
88
5
54
14
22
45
17
1.84

Tables:   1

The End!