Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000386.1 Hibiscus syriacus cultivar Beakdansim tig00000710_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55068

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
583--620
12
3.2
12
81
11
51
21
7
15
55
1.66
586--642
24
2.4
24
87
0
78
17
10
19
52
1.73
1929--1978
20
2.6
19
93
3
82
44
14
6
36
1.69
1931--1978
19
2.5
20
93
3
80
45
14
6
33
1.70
2095--2158
20
3.2
20
80
4
65
32
23
17
26
1.96
2109--2158
21
2.4
21
83
3
66
36
24
16
24
1.94
3462--3508
19
2.4
19
82
3
58
46
4
17
31
1.67
5509--5560
24
2.1
25
85
3
70
69
1
19
9
1.26
17011--17077
3
22.0
3
74
19
59
38
0
1
59
1.06
17011--17072
21
2.9
22
86
11
76
38
0
1
59
1.07
17000--17077
33
2.3
34
86
4
113
41
0
1
57
1.07
18380--18450
27
2.6
28
82
8
83
45
2
2
49
1.31
21717--21772
24
2.3
24
100
0
112
28
17
16
37
1.91
29020--29082
24
2.6
24
87
5
74
11
14
20
53
1.70
30051--30083
16
2.1
16
100
0
66
6
12
24
57
1.57
32679--32725
20
2.4
19
83
13
60
44
4
19
31
1.70
33775--33824
25
2.0
25
100
0
100
56
8
12
24
1.62
34360--34401
21
2.0
22
85
4
59
38
14
21
26
1.91
37983--38022
20
2.0
20
95
0
71
32
20
22
25
1.98
38489--38552
22
3.0
20
78
13
74
25
21
23
29
1.99
46989--47083
41
2.3
42
78
14
115
52
6
4
36
1.46
52068--52112
7
6.0
8
77
12
51
64
0
2
33
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52068--52112
15
3.0
15
76
0
54
64
0
2
33
1.06

Tables:   1

The End!