Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003866.1 Hibiscus syriacus cultivar Beakdansim tig00008319_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51723

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8627--8782
65
2.4
65
83
9
183
31
14
12
41
1.83
10814--10886
33
2.2
33
87
0
119
26
23
8
42
1.82
11081--11136
29
1.9
29
89
7
87
14
23
8
53
1.68
11072--11127
14
3.9
14
71
13
51
16
17
8
57
1.64
11084--11147
29
2.2
29
83
8
78
15
21
7
54
1.66
11772--11825
23
2.4
22
78
12
56
16
7
5
70
1.30
18885--18983
11
8.6
11
82
14
87
24
22
25
28
1.99
18885--18983
46
2.2
45
83
7
119
24
22
25
28
1.99
18931--18963
12
2.8
12
100
0
66
18
18
24
39
1.92
18884--18983
35
2.9
33
82
8
112
24
22
26
28
1.99
18968--19004
17
2.2
17
95
0
65
29
29
16
24
1.96
19291--19372
21
3.9
21
76
12
87
47
29
0
23
1.52
19283--19366
42
2.0
42
81
4
98
45
32
0
22
1.53
19297--19389
42
2.2
42
84
3
116
45
30
0
24
1.54
19651--19680
14
2.1
14
93
0
51
43
0
6
50
1.28
19973--20053
31
2.7
30
75
17
80
34
4
2
58
1.33
21143--21172
14
2.1
14
93
0
51
43
0
6
50
1.28
21465--21545
31
2.7
30
75
17
80
34
4
2
58
1.33
26500--26644
59
2.4
59
84
7
179
29
17
18
34
1.94
26715--26789
29
2.5
30
78
8
73
40
4
24
32
1.73
28578--28823
131
1.9
131
81
3
298
39
18
10
31
1.84
30955--31000
13
3.5
13
78
3
56
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31959--32066
42
2.6
41
82
4
128
32
23
17
26
1.97
32187--32309
42
3.0
41
79
5
115
30
18
22
28
1.98
31264--32797
244
6.3
244
88
1
2110
33
16
16
33
1.92
42827--42872
23
2.0
23
83
8
58
19
10
36
32
1.87
42885--42935
3
16.3
3
88
8
75
64
0
0
35
0.94
44053--44122
12
5.8
12
71
6
52
55
17
11
15
1.68
44058--44145
24
3.7
24
74
6
79
53
17
9
20
1.70
44051--44142
48
1.9
48
88
0
139
54
16
9
19
1.69
44051--44157
48
2.2
48
85
3
135
52
16
11
19
1.74
44052--44157
24
4.4
24
69
9
65
51
16
11
19
1.74
46621--46650
13
2.3
13
100
0
60
13
23
46
16
1.82
49901--49985
3
28.3
3
100
0
170
32
0
0
67
0.91
50581--50606
13
2.0
13
100
0
52
38
0
23
38
1.55
50776--50805
15
2.0
15
100
0
60
46
20
0
33
1.51

Tables:   1

The End!