Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003871.1 Hibiscus syriacus cultivar Beakdansim tig00008341_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53325

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
652--853
37
5.6
36
75
18
172
44
8
3
43
1.52
650--851
109
1.9
106
84
13
268
44
8
3
43
1.52
650--854
36
5.6
37
78
12
178
43
8
3
43
1.52
710--854
75
1.9
76
86
8
208
43
8
3
44
1.52
890--920
2
15.5
2
93
0
53
48
0
3
48
1.17
2382--2445
3
21.3
3
100
0
128
32
0
0
67
0.91
6597--6664
17
4.2
17
72
11
70
36
1
0
61
1.05
6600--6664
24
2.7
24
97
0
121
36
1
0
61
1.05
8995--9026
16
2.0
16
93
0
55
65
18
9
6
1.42
9094--9167
23
3.2
23
80
5
87
60
21
9
8
1.53
9421--9449
14
2.1
14
100
0
58
55
17
13
13
1.70
9452--9503
10
5.0
10
86
9
68
65
17
1
15
1.36
9437--9503
32
2.1
32
82
0
80
65
16
2
14
1.39
15083--15325
121
2.0
123
87
5
350
24
15
16
44
1.86
27771--27854
21
3.9
21
77
10
73
23
35
25
15
1.94
32422--32502
21
3.8
22
77
7
69
23
38
24
13
1.91
35660--36090
216
2.0
218
91
1
706
31
20
16
31
1.95
41929--41958
15
2.0
15
100
0
60
33
0
46
20
1.51
42346--42391
19
2.4
19
100
0
92
30
28
17
23
1.97
48932--48973
22
1.9
22
100
0
84
33
14
19
33
1.91

Tables:   1

The End!