Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003875.1 Hibiscus syriacus cultivar Beakdansim tig00008350_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44092

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1947--2034
11
8.2
10
71
12
50
13
7
2
76
1.11
3077--3129
21
2.6
22
82
11
60
22
11
0
66
1.24
6496--6552
3
19.0
3
85
7
80
64
0
0
35
0.93
6496--6559
21
3.0
21
86
2
83
65
1
0
32
1.02
6515--6570
27
2.1
27
86
3
78
71
1
0
26
0.96
6922--7624
123
5.7
123
94
0
1203
27
18
14
39
1.89
7534--7956
113
3.8
112
85
3
525
28
18
14
39
1.89
15841--15879
15
2.7
15
88
4
53
56
5
12
25
1.57
16128--16214
43
2.0
44
88
2
131
34
24
10
31
1.89
19775--19813
20
2.0
20
84
0
51
23
7
23
46
1.78
24156--24217
14
4.4
14
75
4
52
56
8
9
25
1.59
28019--28057
20
2.0
20
84
0
51
23
7
23
46
1.78
28212--28291
21
3.7
22
76
12
76
16
26
33
23
1.95
35450--35506
3
20.7
3
76
20
54
71
1
0
26
0.95
35448--35503
5
10.4
5
83
12
51
73
1
0
25
0.93
36355--36388
2
17.0
2
93
0
59
47
0
0
52
1.00
36365--36449
16
5.4
16
71
20
63
55
3
3
37
1.34
37843--37905
3
21.0
3
87
6
92
65
0
0
34
0.93
37859--37923
9
6.3
11
84
15
70
70
0
0
29
0.87
37865--37921
12
4.4
14
82
17
70
71
0
0
28
0.86
37844--37910
30
2.2
30
91
2
107
67
0
0
32
0.91
38948--38987
19
2.2
18
86
13
55
22
5
5
67
1.30

Tables:   1

The End!