Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003890.1 Hibiscus syriacus cultivar Beakdansim tig00008403_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  83555

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2247--2359
30
3.9
30
77
10
110
49
6
8
35
1.59
2663--2722
26
2.3
27
77
16
63
53
3
5
38
1.39
10049--10077
14
2.1
14
100
0
58
41
0
17
41
1.49
11194--11275
42
2.0
42
97
0
155
45
24
12
18
1.83
11473--11703
122
1.9
122
82
3
295
31
20
18
29
1.96
12561--12585
2
12.5
2
100
0
50
52
0
48
0
1.00
16757--16822
22
3.1
22
79
12
66
68
3
1
27
1.13
17519--17552
14
2.3
15
90
5
52
29
0
2
67
1.05
23326--23490
60
2.8
60
77
4
174
44
7
18
29
1.77
37800--37883
37
2.2
40
89
6
129
35
13
16
34
1.88
44105--44310
113
1.8
112
88
5
319
39
20
13
27
1.89
45214--45259
18
2.6
18
89
0
74
23
19
26
30
1.98
61976--62004
3
9.7
3
100
0
58
68
0
0
31
0.89
73558--73761
68
3.0
67
81
8
263
49
10
10
28
1.71

Tables:   1

The End!