Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003892.1 Hibiscus syriacus cultivar Beakdansim tig00008407_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69729

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11561--11597
2
18.5
2
100
0
74
51
0
0
48
1.00
14968--14993
3
8.7
3
100
0
52
69
0
0
30
0.89
27574--27631
27
2.2
26
84
9
73
53
17
1
27
1.53
27736--27800
28
2.3
28
79
7
69
52
21
3
23
1.61
27537--27847
157
2.0
152
84
8
380
47
15
5
31
1.69
37122--37151
15
2.0
15
100
0
60
40
26
6
26
1.81
47989--48035
20
2.2
21
78
17
53
44
6
12
36
1.68
52060--52181
61
2.0
61
93
0
208
37
18
17
27
1.92
58496--58555
2
30.5
2
96
3
113
50
0
0
50
1.00
59599--59637
21
1.9
21
89
5
62
48
10
7
33
1.66
62631--62681
21
2.4
21
93
0
93
21
19
31
27
1.97
67817--67854
2
19.5
2
83
5
51
50
2
0
47
1.15
68532--68645
42
2.7
44
76
15
114
31
20
21
26
1.98
68548--68648
42
2.4
43
81
6
116
33
19
20
25
1.97
69095--69155
21
3.0
21
82
2
70
1
42
18
37
1.60
69107--69192
21
4.1
21
81
3
93
2
41
18
37
1.63

Tables:   1

The End!