Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003897.1 Hibiscus syriacus cultivar Beakdansim tig00008425_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53960

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1787--1820
9
3.4
10
88
12
52
85
0
5
8
0.75
2868--3218
55
6.4
55
92
1
591
30
14
24
30
1.94
2868--3218
109
3.2
110
92
2
591
30
14
24
30
1.94
2868--3225
164
2.2
165
94
2
623
31
14
24
30
1.95
3196--3626
111
3.9
110
82
4
460
33
17
25
24
1.96
2868--3626
55
13.8
55
82
5
479
32
15
25
26
1.96
3804--3864
3
20.7
3
80
9
72
39
1
0
59
1.08
3807--3873
33
2.0
34
88
5
100
40
2
0
56
1.14
10144--10191
17
2.8
17
78
6
53
52
0
0
47
1.00
18130--18189
29
2.0
30
90
3
95
13
15
8
63
1.51
42718--42750
16
2.0
17
88
5
50
33
30
6
30
1.82
46787--46817
16
1.9
16
100
0
62
6
16
38
38
1.74

Tables:   1

The End!