Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003901.1 Hibiscus syriacus cultivar Beakdansim tig00008430_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70801

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3868--3981
31
3.7
31
81
5
124
36
15
19
28
1.92
19622--19646
11
2.3
11
100
0
50
56
12
8
24
1.62
20606--20651
24
1.9
24
95
0
83
2
39
8
50
1.46
25732--25777
24
1.9
24
95
0
83
2
39
8
50
1.46
28855--28920
33
2.0
33
88
2
98
51
16
7
24
1.70
29006--29035
3
10.0
3
100
0
60
66
0
0
33
0.92
29027--29301
68
4.1
68
82
5
362
48
10
11
29
1.73
32494--32872
130
2.8
134
81
6
446
25
17
29
27
1.97
54522--54864
171
2.0
171
97
0
650
39
16
13
31
1.87
55065--55090
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!