Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003909.1 Hibiscus syriacus cultivar Beakdansim tig00008455_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45937

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1687--1764
39
2.0
39
97
0
147
25
15
16
42
1.87
5939--5992
28
1.9
28
100
0
108
22
14
12
50
1.77
5938--5998
28
2.2
28
90
0
104
24
14
13
47
1.80
13257--13350
40
2.3
41
77
15
97
45
2
5
46
1.37
14120--14152
3
11.0
3
100
0
66
66
0
0
33
0.92
16106--16144
21
2.0
20
85
10
53
69
0
0
30
0.89
24329--24373
15
3.0
14
81
12
54
75
4
8
11
1.17
30766--30810
15
3.3
15
70
23
53
57
2
0
40
1.11
32631--32659
3
9.7
3
100
0
58
68
0
31
0
0.89
39911--39957
21
2.3
20
78
10
51
36
4
10
48
1.57
40041--40065
13
1.9
13
100
0
50
40
24
0
36
1.55
40467--40507
18
2.2
19
86
4
57
51
12
0
36
1.40
40510--40621
28
4.0
28
74
12
95
41
8
0
50
1.34
40645--40766
31
4.0
31
81
8
124
62
3
2
31
1.24
40654--41009
30
11.8
29
72
9
176
53
3
7
35
1.46

Tables:   1

The End!