Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003913.1 Hibiscus syriacus cultivar Beakdansim tig00008462_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52216

Tables:   1   

This is table  1  of  1  ( 37 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4076--4546
199
2.5
199
78
10
473
23
26
22
27
1.99
5289--5351
29
2.2
29
85
0
81
25
19
12
42
1.86
13149--13214
27
2.4
27
89
0
105
30
15
15
39
1.88
17202--17298
34
2.9
33
79
7
99
29
3
6
60
1.36
17382--17412
2
15.5
2
100
0
62
48
0
0
51
1.00
20677--20737
22
2.7
22
82
7
79
80
6
13
0
0.90
20677--20745
22
3.3
21
81
4
77
79
5
13
1
0.97
20677--20745
20
3.3
20
82
8
75
79
5
13
1
0.97
21366--21414
22
2.2
22
92
0
80
32
24
14
28
1.94
22346--22628
36
8.0
36
77
9
278
26
18
14
40
1.89
22346--22591
102
2.3
104
83
8
286
26
18
14
41
1.88
22366--22691
138
2.4
138
82
2
413
27
19
12
39
1.88
23403--23814
105
4.0
106
87
4
579
34
25
17
22
1.96
24940--24994
24
2.4
23
76
11
60
27
3
1
67
1.17
25005--25037
15
2.1
17
88
11
52
27
9
0
63
1.24
29098--29919
216
3.8
216
93
2
1338
51
8
11
28
1.66
29961--30023
20
3.0
21
80
15
85
47
3
6
42
1.44
29959--30070
20
5.9
18
69
20
59
45
5
6
42
1.52
30115--30152
11
3.5
11
88
0
58
50
2
2
44
1.30
30158--30209
17
3.0
17
80
2
59
46
0
3
50
1.20
30190--30248
22
2.5
24
78
13
68
44
3
5
47
1.42
30237--30263
2
13.5
2
100
0
54
48
0
0
51
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30267--30291
7
3.6
7
100
0
50
16
0
40
44
1.47
29951--30379
42
9.7
43
64
24
130
43
3
8
44
1.52
30313--30410
41
2.4
41
81
8
112
44
4
7
43
1.50
30404--30456
19
2.6
21
82
5
65
49
5
5
39
1.50
30309--30501
92
2.1
93
81
5
230
46
4
5
44
1.45
30521--32015
6
259.0
6
90
8
2383
32
0
0
67
0.91
32006--32045
11
3.5
11
86
3
53
50
0
0
50
1.00
32036--32076
21
2.0
21
85
9
57
53
0
2
43
1.13
32122--32248
61
2.1
61
83
5
159
50
5
7
36
1.55
33294--33322
2
14.5
2
100
0
58
51
0
0
48
1.00
33314--33367
26
2.1
26
89
6
83
27
3
16
51
1.61
38901--38938
20
1.9
20
88
0
58
13
26
36
23
1.91
47743--47777
2
17.5
2
100
0
70
51
0
0
48
1.00
49158--49202
20
2.4
18
79
13
54
31
13
4
51
1.61
49915--49941
2
13.5
2
100
0
54
0
51
0
48
1.00

Tables:   1

The End!