Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003916.1 Hibiscus syriacus cultivar Beakdansim tig00008467_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72941

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1163--1197
18
2.0
17
88
5
52
57
0
2
40
1.14
11240--11293
2
27.0
2
88
0
81
55
0
0
44
0.99
13969--13998
2
15.0
2
100
0
60
50
0
0
50
1.00
14690--14754
20
3.2
20
95
0
112
56
0
13
29
1.38
18107--18168
19
3.4
19
74
17
76
3
14
30
51
1.58
18303--18327
12
2.1
12
100
0
50
52
32
16
0
1.44
21358--21430
30
2.5
29
76
10
76
38
9
12
39
1.76
23413--23441
2
14.5
2
100
0
58
48
0
0
51
1.00
25707--25745
21
1.9
20
84
5
51
46
5
23
25
1.73
30475--30505
2
15.5
2
100
0
62
51
0
0
48
1.00
31779--31811
16
2.1
16
88
5
50
30
9
0
60
1.27
32552--32582
2
15.5
2
100
0
62
48
0
0
51
1.00
38548--38576
15
1.9
15
100
0
58
27
24
6
41
1.80
40014--40055
22
1.9
22
85
0
57
23
9
0
66
1.21
40054--40129
36
2.1
36
85
7
100
47
1
3
47
1.29
40275--40312
20
1.9
20
88
0
58
21
26
10
42
1.85
40204--40465
131
2.0
131
96
0
488
33
27
10
28
1.90
40406--40443
20
1.9
20
88
0
58
21
26
10
42
1.85
45285--45433
73
2.0
75
93
2
257
43
17
16
22
1.88
49434--49467
17
2.1
16
88
5
50
14
8
0
76
1.01
55814--55856
20
2.1
21
87
8
63
18
13
0
67
1.23
55813--55862
20
2.5
20
75
15
59
18
18
0
64
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
59681--59713
16
2.1
16
88
11
50
15
9
0
75
1.03
65176--65244
21
3.3
21
87
4
95
21
20
28
28
1.98
65405--65568
81
2.0
81
85
2
222
25
15
31
26
1.96
65550--65634
33
2.6
34
87
7
131
21
8
41
29
1.82
65757--65824
33
2.1
33
82
0
82
25
5
36
32
1.80
65918--66084
84
2.0
84
92
0
280
22
18
31
26
1.97
65790--66075
147
1.9
147
83
6
366
23
16
32
28
1.96
66066--66203
42
3.1
42
69
18
127
17
21
28
33
1.96
66064--66205
48
3.1
48
81
12
197
17
20
28
33
1.95
69165--69259
45
2.1
46
88
2
138
47
3
4
45
1.38
71202--71235
11
3.0
11
87
8
50
20
32
29
17
1.96
71473--71562
31
3.0
29
73
18
76
24
17
23
34
1.96

Tables:   1

The End!