Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003917.1 Hibiscus syriacus cultivar Beakdansim tig00008468_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67566

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1108--1152
20
2.2
20
84
7
56
24
26
13
35
1.92
8847--9045
54
3.7
54
91
2
337
24
13
12
50
1.75
10662--10737
31
2.6
29
79
8
82
48
11
2
36
1.54
10733--10799
30
2.2
30
84
7
82
34
2
13
49
1.57
10749--10821
30
2.4
30
81
2
83
34
4
15
46
1.64
18578--18618
13
3.2
13
83
13
57
41
21
19
17
1.90
20799--20932
66
2.0
66
89
2
207
29
22
12
35
1.91
22381--22433
20
2.6
20
84
3
61
32
24
20
22
1.98
23779--23825
22
2.1
23
84
4
60
14
10
12
61
1.56
24253--24333
13
6.5
12
74
20
51
64
1
1
33
1.10
24253--24436
12
14.9
12
68
23
91
59
2
0
38
1.14
24255--24550
7
43.4
7
73
19
204
57
4
0
37
1.23
24281--24548
2
144.5
2
68
25
128
56
4
0
38
1.24
28907--29000
42
2.3
39
77
12
98
71
2
9
17
1.23
28985--29103
52
2.3
52
81
13
147
67
1
7
23
1.26
30263--30356
4
22.5
4
71
20
52
63
1
1
34
1.08
30263--30384
19
6.6
18
75
18
76
60
1
0
36
1.12
30265--30493
22
11.0
21
70
19
85
56
3
1
38
1.24
30263--30372
34
3.3
33
78
16
104
61
1
0
35
1.13
30287--30503
2
119.5
2
65
27
76
54
3
1
40
1.27
30442--30491
9
5.6
9
75
17
50
52
4
0
44
1.20
30287--30503
32
7.2
33
70
23
106
54
3
1
40
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33780--33893
57
2.0
57
86
3
158
37
17
6
38
1.75
37173--37223
21
2.4
21
86
0
66
39
19
33
7
1.81
37538--37663
44
2.9
44
84
4
159
34
21
16
27
1.95
37700--37927
43
5.3
43
79
4
174
34
24
17
24
1.96
37720--37802
42
2.0
41
90
4
132
30
21
24
24
1.99
37782--37985
43
4.7
43
85
0
210
37
25
13
24
1.91
37742--37993
43
5.9
43
82
0
191
34
24
15
25
1.94
38063--38096
15
2.3
15
90
10
52
11
26
32
29
1.92
39288--39373
42
2.0
42
93
0
145
27
24
10
37
1.88
42952--43160
43
4.9
43
80
1
213
26
18
22
31
1.97
43580--43665
21
4.0
21
76
8
82
3
39
17
39
1.67
43581--43665
33
2.6
33
85
10
120
3
40
16
40
1.66
43579--43654
12
6.6
12
74
18
63
2
39
18
39
1.65
51413--51555
77
1.9
77
91
2
234
48
19
11
20
1.79
55616--55741
50
2.5
50
86
0
171
15
35
28
19
1.93
55947--55987
18
2.3
18
91
4
66
29
4
2
63
1.28
56049--56381
111
3.0
111
96
0
603
36
7
10
45
1.67
62552--62637
37
2.4
36
90
7
138
43
10
4
41
1.60
63293--63343
24
2.1
24
88
0
75
15
11
17
54
1.70
64258--64314
16
3.7
16
88
4
82
14
10
17
57
1.64
64376--64408
16
2.1
16
94
0
57
3
12
24
60
1.46

Tables:   1

The End!