Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003918.1 Hibiscus syriacus cultivar Beakdansim tig00008470_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  76217

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2567--2640
22
3.4
22
71
15
73
45
0
0
54
1.00
2561--2643
36
2.3
35
78
10
87
44
0
0
55
0.99
4766--4944
89
2.0
89
91
0
286
33
21
17
27
1.96
6039--6090
20
2.7
20
84
3
61
34
17
21
26
1.95
6412--6687
54
5.1
54
85
5
389
31
17
18
31
1.94
13571--13610
17
2.3
18
86
4
55
40
0
0
60
0.97
14132--14186
27
2.0
28
85
3
76
34
18
16
30
1.93
16040--16071
14
2.3
14
94
0
55
43
31
0
25
1.55
16280--16324
23
2.0
23
86
0
63
26
28
22
22
1.99
20821--20854
4
8.0
4
87
12
50
26
0
23
50
1.50
22396--22457
32
2.0
32
93
6
110
33
4
12
48
1.63
27376--27426
21
2.4
21
79
17
61
43
1
1
52
1.23
27376--27429
22
2.5
23
85
11
71
42
1
1
53
1.22
27631--27663
3
11.0
3
100
0
66
33
0
0
66
0.92
38971--39005
10
3.5
10
85
14
54
80
8
11
0
0.92
38970--39007
20
1.9
20
100
0
76
78
10
10
0
0.95
38974--39023
20
2.3
20
86
10
64
78
10
10
2
1.06
40078--40113
18
2.0
18
88
0
54
16
5
33
44
1.71
40600--40675
36
2.1
37
85
7
102
26
21
14
38
1.91
41636--41796
84
1.9
84
92
0
268
35
22
18
23
1.95
41539--41896
190
1.9
190
94
0
626
36
24
17
22
1.95
41720--41941
106
2.1
106
92
0
363
33
22
19
23
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
43376--43424
16
2.9
16
84
6
53
38
0
2
59
1.09
43393--43432
2
20.5
2
94
5
73
47
0
0
52
1.00
51206--51259
21
2.5
22
82
5
58
53
3
5
37
1.42
51603--51643
21
1.9
22
90
5
66
34
12
4
48
1.62
62007--62049
20
2.3
19
84
11
54
39
13
16
30
1.87
62710--62767
23
2.5
22
83
13
64
55
18
3
22
1.58
64284--64407
2
65.0
2
72
12
64
50
1
6
41
1.37
64380--64418
14
2.8
14
88
0
51
48
0
7
43
1.31
64804--64872
20
3.5
20
87
0
102
39
7
17
36
1.77
70455--70508
26
2.1
26
92
0
90
18
16
12
51
1.75

Tables:   1

The End!