Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003920.1 Hibiscus syriacus cultivar Beakdansim tig00008473_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69860

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7987--8069
30
2.8
30
83
1
96
33
28
19
18
1.95
8044--8139
31
3.1
31
81
0
111
35
20
15
28
1.93
8819--8876
20
2.7
20
86
10
71
24
22
24
29
1.99
12414--12474
23
2.6
23
94
2
104
24
21
22
31
1.98
13673--13713
20
2.0
20
85
0
55
41
17
19
21
1.90
19480--19589
44
2.5
44
84
0
148
30
22
15
30
1.95
19385--19735
179
1.9
181
86
2
492
30
20
14
33
1.93
21979--22032
2
27.0
2
100
0
108
50
0
0
50
1.00
22526--22641
38
3.0
39
82
2
153
32
16
29
21
1.95
26343--26372
14
2.1
14
100
0
60
23
30
6
40
1.80
32340--32399
27
2.3
27
83
11
72
78
6
10
5
1.08
32381--32430
17
2.9
17
78
16
50
80
8
0
12
0.92
34738--34878
73
1.9
73
89
2
221
43
5
7
42
1.57
48433--48496
32
2.1
31
88
5
94
31
4
15
48
1.66
53974--54150
59
3.0
60
81
7
202
32
15
15
37
1.88
56964--57005
3
14.0
3
94
0
75
64
0
2
33
1.07
57713--57782
34
2.1
32
84
5
86
24
28
15
31
1.96
58147--58237
20
4.9
19
71
15
57
24
16
29
29
1.96
58204--58301
21
4.7
20
78
10
81
23
18
32
25
1.97
58381--58438
30
2.0
29
90
10
91
44
17
5
32
1.70
58381--58440
29
2.0
30
93
6
104
43
16
6
33
1.74
61502--61541
21
1.9
22
90
10
66
12
10
40
37
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
61571--61619
21
2.3
21
100
0
98
22
24
24
28
1.99
61692--61738
20
2.3
20
96
0
85
27
21
31
19
1.97
61803--61858
21
2.7
21
94
0
94
23
19
35
21
1.96
61938--61995
30
2.0
29
90
10
91
44
17
5
32
1.70
61938--61997
29
2.0
30
93
6
104
43
16
6
33
1.74
62152--62248
44
2.2
45
92
3
169
30
25
3
40
1.71
63846--63875
15
1.9
16
93
6
53
3
36
0
60
1.14
65348--65445
21
4.7
20
80
10
90
23
18
33
24
1.97
65347--65445
42
2.4
42
84
3
119
23
18
34
24
1.96
65514--65581
29
2.3
30
87
5
93
48
14
5
30
1.68
65525--65584
29
2.0
30
93
6
104
43
15
6
35
1.72
66335--66436
3
33.7
3
88
9
154
64
0
0
35
0.94

Tables:   1

The End!