Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003922.1 Hibiscus syriacus cultivar Beakdansim tig00008480_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72755

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8895--8964
16
4.5
15
70
13
52
31
4
4
60
1.36
17784--17977
97
2.0
97
98
0
379
28
18
15
37
1.92
18137--18292
85
1.8
85
87
2
233
27
19
22
30
1.98
18137--18292
43
3.7
43
83
3
199
27
19
22
30
1.98
18307--18454
44
3.4
44
86
1
192
33
18
21
27
1.96
18776--18823
21
2.3
21
85
0
60
6
39
14
39
1.71
27952--28005
22
2.5
22
84
6
65
29
20
5
44
1.74
42647--42745
44
2.2
44
85
0
135
35
17
10
37
1.83
44906--44987
40
2.0
40
100
0
164
46
9
2
41
1.50
48122--48175
24
2.2
24
100
0
108
18
14
14
51
1.76
51052--51097
18
2.6
18
78
0
56
54
39
2
4
1.32
52805--52841
13
2.8
13
91
0
65
29
21
16
32
1.95
62490--62531
17
2.5
17
85
11
52
30
19
16
33
1.94

Tables:   1

The End!