Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003925.1 Hibiscus syriacus cultivar Beakdansim tig00008484_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72417

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11720--11766
21
2.2
21
100
0
94
38
14
23
23
1.92
21922--21970
16
3.2
16
66
16
50
51
6
2
40
1.38
21922--21977
29
1.9
29
100
0
112
48
7
3
41
1.48
25369--25405
17
2.2
17
90
0
56
37
10
8
43
1.69
30743--30819
16
4.8
16
77
7
68
15
11
24
48
1.79
31684--31760
32
2.4
32
84
4
93
37
19
6
36
1.78
49453--49493
21
2.0
21
85
0
55
21
2
21
53
1.57
52684--52832
76
2.0
74
89
2
226
55
5
7
32
1.50
58452--59292
183
4.6
183
87
3
1099
44
12
14
27
1.82
59135--59455
163
2.0
161
87
3
464
46
13
12
27
1.79
59634--60137
198
2.5
200
85
6
644
40
13
15
30
1.86
59564--60137
198
2.9
197
83
6
642
39
14
14
30
1.87
60157--60201
23
2.0
23
86
0
63
37
17
6
37
1.76
60244--60281
16
2.4
16
86
8
51
28
21
13
36
1.91
62433--62501
21
3.3
21
89
0
111
28
26
17
27
1.97
65689--65799
50
2.2
50
75
3
116
39
13
8
38
1.74
66167--66239
2
37.5
2
89
5
114
50
1
1
46
1.18

Tables:   1

The End!