Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003927.1 Hibiscus syriacus cultivar Beakdansim tig00008489_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56684

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
237--358
31
4.0
31
80
4
131
45
14
13
26
1.83
5077--5266
32
5.8
32
77
10
170
26
10
18
44
1.82
5079--5137
18
3.4
17
74
6
55
23
8
20
47
1.77
5065--5266
68
3.1
68
89
5
283
26
10
18
44
1.82
16118--16166
20
2.5
20
81
15
59
57
0
4
38
1.18
16201--16248
15
3.2
15
86
13
64
35
0
0
64
0.94
21941--21994
27
2.0
27
100
0
108
48
14
22
14
1.81
26784--26827
17
2.4
18
81
14
54
50
2
2
45
1.27
45061--45109
22
2.2
22
82
7
64
32
30
28
8
1.86
46639--46699
23
2.7
23
81
0
86
19
24
26
29
1.99
51594--51653
23
2.6
23
94
0
102
18
28
26
26
1.98

Tables:   1

The End!