Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003928.1 Hibiscus syriacus cultivar Beakdansim tig00008491_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  87554

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4039--4068
14
2.1
14
100
0
60
26
6
13
53
1.64
11550--11592
21
2.0
21
82
8
52
51
13
16
18
1.77
12519--12560
22
1.9
22
90
0
66
42
9
0
47
1.36
25097--25240
69
2.1
69
98
0
279
28
22
12
36
1.91
27030--27089
21
2.9
21
84
0
84
8
26
40
25
1.84
28919--29099
90
2.0
90
93
0
308
37
16
12
33
1.86
29099--29159
30
2.0
32
87
6
90
45
9
16
27
1.79
35606--35638
16
2.1
16
100
0
66
36
21
24
18
1.95
40093--40183
42
2.2
42
95
0
164
37
32
3
26
1.73
47617--48382
381
2.0
381
99
0
1523
36
16
18
27
1.93
50264--50319
21
2.7
21
85
0
76
23
26
21
28
1.99
50748--50800
27
2.0
27
88
0
79
16
7
16
58
1.60
53573--53617
21
2.1
21
84
8
56
60
11
0
28
1.31
58958--58990
2
16.5
2
100
0
66
51
0
48
0
1.00
63232--63286
21
2.6
21
82
0
65
16
1
54
27
1.52
66786--66908
34
3.5
36
91
6
200
39
0
0
60
0.97
69252--69319
36
1.9
35
84
3
91
26
16
2
54
1.56
72895--72943
18
2.8
16
75
19
53
48
0
0
51
1.00
72895--72944
19
2.8
18
80
14
59
50
0
0
50
1.00
73414--73438
12
2.1
12
100
0
50
48
0
0
52
1.00
77439--77475
17
2.2
17
90
0
56
27
0
2
70
1.01
77244--77457
108
2.0
106
97
2
403
30
11
14
42
1.81

Tables:   1

The End!