Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003932.1 Hibiscus syriacus cultivar Beakdansim tig00008497_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55718

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4607--4640
15
2.3
15
89
0
50
11
67
14
5
1.39
6312--6380
25
2.8
25
88
2
104
39
5
20
34
1.76
8377--8406
15
1.9
16
93
6
53
40
0
3
56
1.16
8836--8871
12
3.0
12
91
0
54
72
2
0
25
0.98
8839--8872
11
3.1
11
86
0
50
70
2
0
26
1.01
13527--13598
21
3.5
21
81
7
67
18
15
26
40
1.90
29938--29978
12
3.4
12
82
0
55
41
21
17
19
1.90
30581--30657
18
4.1
18
78
15
75
31
29
19
19
1.96
30576--30661
40
2.2
40
86
0
127
32
26
17
23
1.96
33984--34053
26
2.7
26
93
0
104
11
24
14
50
1.75
38169--38208
17
2.3
18
87
12
57
67
2
5
25
1.23
38538--38568
3
10.3
3
100
0
62
32
0
0
67
0.91
39868--39900
13
2.4
14
85
10
50
69
0
0
30
0.88
39867--39912
21
2.3
19
88
7
65
69
0
0
30
0.89
39908--39941
17
1.9
18
94
5
61
64
8
0
26
1.22
39979--40008
10
3.0
10
90
0
51
33
0
36
30
1.58
40518--40569
16
3.4
16
68
10
54
38
7
0
53
1.30
40519--40580
30
2.1
30
100
0
124
35
12
0
51
1.40
40824--40878
28
2.0
28
89
7
85
38
30
20
10
1.87
42917--42975
24
2.5
24
78
13
68
25
11
11
50
1.73
46003--46069
33
2.0
33
94
0
116
49
1
7
41
1.40
46837--46910
32
2.4
30
82
10
80
35
5
4
55
1.42
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
51123--51279
75
2.1
74
81
5
181
37
10
14
37
1.81
51233--51438
104
2.0
104
97
0
385
38
12
12
36
1.81
53707--53746
21
1.9
21
94
0
71
25
35
27
12
1.92

Tables:   1

The End!