Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003937.1 Hibiscus syriacus cultivar Beakdansim tig00008508_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51099

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21421--21567
61
2.3
64
84
5
201
27
17
27
27
1.98
29426--29481
21
2.7
21
85
0
67
39
16
39
5
1.71
29841--29959
44
2.7
43
76
5
123
28
21
21
29
1.98
29947--30113
43
3.9
42
75
12
126
31
23
19
25
1.98
30324--30379
25
2.2
25
74
0
58
41
17
5
35
1.73
31881--31992
31
3.6
31
93
0
188
39
23
17
19
1.92
33562--33587
3
8.7
3
100
0
52
30
0
0
69
0.89
36374--36498
31
4.0
31
94
2
207
37
23
19
20
1.94
38527--38609
41
2.0
41
88
0
121
53
4
4
37
1.44
41702--41768
25
2.8
25
95
4
120
37
7
0
55
1.28
49640--49676
15
2.5
15
95
0
65
18
56
5
18
1.60

Tables:   1

The End!