Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003945.1 Hibiscus syriacus cultivar Beakdansim tig00008527_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58402

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4473--4504
16
2.0
16
100
0
64
31
12
25
31
1.92
8544--8644
51
2.0
51
96
0
184
35
12
20
30
1.91
10405--10432
14
2.0
14
100
0
56
50
14
21
14
1.78
17352--17490
60
2.3
60
83
2
163
35
20
4
38
1.73
17668--17748
29
2.8
29
73
16
78
40
3
20
34
1.71
19525--19557
17
1.9
17
93
0
57
54
0
6
39
1.25
35594--35622
4
7.2
4
100
0
58
24
0
0
75
0.80
36122--36168
23
2.0
23
83
4
58
68
6
2
23
1.24
36938--36973
18
2.0
18
94
0
63
11
25
27
36
1.90
40998--41048
24
2.1
24
92
0
84
68
3
0
27
1.07
42758--43443
195
3.5
198
75
3
499
30
21
19
28
1.97
42504--43582
201
5.4
199
75
5
799
29
21
19
29
1.98
44071--44403
168
2.0
166
92
1
560
22
25
22
29
1.99
44280--44377
33
2.9
34
80
4
101
24
25
18
31
1.97

Tables:   1

The End!