Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003946.1 Hibiscus syriacus cultivar Beakdansim tig00008529_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53714

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7003--7046
21
2.0
22
87
12
65
40
11
15
31
1.83
7631--7816
90
2.1
90
98
1
363
40
12
10
36
1.78
16918--16990
28
2.6
29
71
6
69
34
19
6
39
1.78
22699--22743
12
3.6
12
85
11
63
44
17
20
17
1.87
22705--22744
12
3.1
13
86
13
64
45
15
17
22
1.85
25036--25075
21
1.9
21
94
0
71
30
15
7
47
1.72
25070--25168
33
3.0
33
94
1
164
32
7
15
45
1.73
25154--25208
13
4.2
13
75
13
58
34
3
12
49
1.59
25604--25659
15
3.6
15
79
9
58
32
10
12
44
1.77
27032--27124
31
3.0
31
98
0
177
30
6
24
38
1.81
34089--34484
197
2.0
198
93
1
670
32
11
12
43
1.78
35396--35473
23
3.3
23
90
1
102
32
21
20
25
1.98
41589--41633
20
2.2
20
96
0
81
20
15
17
46
1.84
42353--42414
23
2.7
22
90
5
97
29
24
24
22
1.99
43068--43118
20
2.5
20
84
6
68
27
27
11
33
1.92
51138--51193
21
2.6
22
91
2
87
14
19
44
21
1.86
52987--53027
21
1.9
22
85
5
57
29
0
41
29
1.56

Tables:   1

The End!