Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000395.1 Hibiscus syriacus cultivar Beakdansim tig00000728_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72626

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2969--3012
21
2.1
21
82
0
52
9
38
15
36
1.80
4006--4043
20
1.9
20
88
0
58
31
31
15
21
1.94
6946--6999
28
1.9
28
81
7
65
38
0
5
55
1.23
7024--7065
21
2.0
22
86
13
61
45
0
7
47
1.30
7024--7065
22
2.0
21
81
13
50
45
0
7
47
1.30
7115--7160
24
1.9
24
86
0
65
45
0
0
54
0.99
7216--7250
2
17.5
2
93
0
52
45
0
5
48
1.26
11010--11051
22
1.9
22
100
0
84
40
28
9
21
1.84
15162--15457
150
2.0
150
97
0
565
40
19
13
26
1.89
31883--31995
59
1.9
59
92
0
190
36
22
15
26
1.93
35933--36001
17
3.9
17
88
3
93
14
21
44
18
1.85
36000--36040
19
2.2
19
100
0
82
31
31
19
17
1.95
36009--36058
9
5.1
10
72
13
50
32
28
20
20
1.97
36004--36058
19
2.8
19
88
2
74
32
29
20
18
1.96
39398--39454
3
19.0
3
96
0
105
31
0
1
66
1.02
39550--39585
6
5.8
6
90
3
54
19
0
47
33
1.50
42652--42688
2
18.5
2
100
0
74
51
0
0
48
1.00
43832--44132
149
2.0
149
96
0
548
28
22
15
32
1.95
50314--50342
12
2.5
12
94
5
51
37
34
6
20
1.80
58645--58899
138
1.8
138
88
0
393
39
16
14
29
1.89
65558--65594
19
1.9
19
88
0
56
21
24
29
24
1.99
65593--65751
64
2.5
64
82
2
185
29
16
23
30
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68451--68524
21
3.4
21
66
14
60
33
20
20
25
1.97
68456--68548
44
2.1
44
86
6
125
34
20
20
24
1.96

Tables:   1

The End!