Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01003954.1 Hibiscus syriacus cultivar Beakdansim tig00008550_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59106

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1050--1116
23
3.0
23
86
4
91
20
26
28
23
1.99
1025--1127
22
4.7
22
85
3
127
20
27
28
24
1.99
1131--1184
27
1.9
27
82
14
65
44
16
7
31
1.75
4934--4973
21
1.9
21
90
10
64
37
7
0
55
1.29
7021--7065
23
2.0
23
86
8
65
35
0
13
51
1.41
13163--13201
21
1.9
20
94
5
69
38
23
12
25
1.90
30096--30178
27
3.0
27
78
8
69
24
15
37
22
1.93
30086--30186
30
3.5
30
74
8
91
26
12
37
22
1.91
32765--32808
20
2.3
19
84
7
54
45
6
27
20
1.76
33834--33877
20
2.3
19
84
7
54
45
6
27
20
1.76
34903--34946
20
2.3
19
84
7
54
45
6
27
20
1.76
45500--45586
27
3.1
26
80
11
84
24
14
39
21
1.91
45494--45594
30
3.5
30
79
8
118
26
12
38
21
1.90
48160--48203
20
2.3
19
84
7
54
45
6
27
20
1.76
57780--57838
21
2.6
23
86
10
86
32
18
18
30
1.95

Tables:   1

The End!